Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015942299.1_cds_XP_016485816.1_76707
CDS Infomation

[gene=LOC107806206] [db_xref=GeneID:107806206] [protein=premnaspirodiene oxygenase-like] [protein_id=XP_016485816.1] [location=complement(join(28507..29118,29254..30198))] [gbkey=CDS]
Sequence

ATGCTAGTAAATTTGTCATACCAATCTAGATCTGTGATTTGTCTAGTCAACATAATAATG
GAAGCTTCTTTCTTCATTATCATCTTCCTCTTTTTCCTACCAATGATGTTCATATTCATC
AAGGATCACAAAAGAGGGCGAAAAAACTTGCCTCCGGGACCATGGAAGCTCCCACTCATT
GGGAACTTGCATCAGCTGGGAATTAGCTCCCCCCATGTTGCTCTCAAGGAATTAGCTGAG
AAATATGGACCTTTGATGCACCTAAAACTAGGTGAATGTTCAACTATTGTCATATCATCG
TATGAAATGCTGAAAGAAGTGATAAGAATAAGTGATATCGTGTTTGCAAATAGGCCGGAT
CTCCTTCTCTCAACTATGATGTACGATGGTGGAGACATCGGTTTTGCTCCCTACGGTGAT
TACTGGAAACAAATGCGCAAAATTTGCATTTTAGAGCTCCTAAGTCCAAGAAGGGTTCGG
TCGACTTATCCTCTAATGGAGGAAGAGATTTCGCGCTTAGTTAAATCTATCAAGGCCTCA
GGCGCATGTACCCCAATTAATATGTCTGAATGTTTTAAAACGCTCACTTGTGCTATTGTT
TGCAGAGCTTCAGTTGGAATGGCTAATAAAGATTCCGACTCATTGATTTTGGCAGCAAAA
GAAGCAACAACTATCGGAGGACTCTTAAATATCCCAGATTTGTTCCCTTCCCTCAAGTTT
CTTCCGTATATCACAGGATCCAAGCAAAAACTAGTTAAAATGCATCAAGTATGTGATCGT
CTTCTTGAAGAAATTGTTCGTGAACATGAAGATAGCATACAAAGAAGTAACGGTGAACCA
ATTGATGAAGAAGATCTTTTGCACGTTCTTCTAAGGCTTGGGGAAAAGGAGAGACACAAA
TTTCAAATCCCTATAACAAGAGATAACATAAAGGCCATAATCTTGGATATGCTCATTGCC
GGAACTGATACCACAGCAACTACATTAGAATGGACCATGTCCGAATTAATGAAGAATCCG
ACAATCATGAAAAAAGCTCAAGCTGAAGTAAGAGAAACTTTGAAAGGAAAGAAAATAGTG
GATCATAGTGATATTCAGAATTTGAAATACCTGAAATTGGTAGTTAAGGAAACTCTAAGG
TTTCATCCTCCTGGTCCCTTGTCTGTACCTAGGGAATCAAGAGAGGAGTGCGAGATTAAT
GGATACGTTATACCGAATAAAACAATAGCCCTAGTGAATATGTGGGCAATGGGAAGGGAT
CCCCAATATTGGCGTGATCCAGAGAAATTTGAGCCCGAGAGATTCAACTTTATAGATGAT
ATCAACAGATCAATTCCTCCTGAGTTCTTCGGATTTGGATTTGGGAGAAGAGCTTGTCCA
GGAATGTCATTTGCTATAGCAAACCTTGAGCTTACTCTGGCTAGATTACTCTACCATTTT
GATTGGAAACTTCCTAATGGTATAAATCCCGAGGAATTAGATATGACTGAAACTTTTGGT
GCTGCCGTTGCAAGGAAAAATAATTTGCACTTGTTTGCTTCACCGTATGATTATTAA

Peptide Sequence

PEP ID

XP_016485816.1
PEP Infomation

PREDICTED: premnaspirodiene oxygenase-like [Nicotiana tabacum]
Sequence

MLVNLSYQSRSVICLVNIIMEASFFIIIFLFFLPMMFIFIKDHKRGRKNLPPGPWKLPLI
GNLHQLGISSPHVALKELAEKYGPLMHLKLGECSTIVISSYEMLKEVIRISDIVFANRPD
LLLSTMMYDGGDIGFAPYGDYWKQMRKICILELLSPRRVRSTYPLMEEEISRLVKSIKAS
GACTPINMSECFKTLTCAIVCRASVGMANKDSDSLILAAKEATTIGGLLNIPDLFPSLKF
LPYITGSKQKLVKMHQVCDRLLEEIVREHEDSIQRSNGEPIDEEDLLHVLLRLGEKERHK
FQIPITRDNIKAIILDMLIAGTDTTATTLEWTMSELMKNPTIMKKAQAEVRETLKGKKIV
DHSDIQNLKYLKLVVKETLRFHPPGPLSVPRESREECEINGYVIPNKTIALVNMWAMGRD
PQYWRDPEKFEPERFNFIDDINRSIPPEFFGFGFGRRACPGMSFAIANLELTLARLLYHF
DWKLPNGINPEELDMTETFGAAVARKNNLHLFASPYDY

Transcript Sequence

Gene sequence data has not been registered.